Package: omixVizR 1.4.5
omixVizR: A Toolkit for Omics Data Visualization
Provides a suite of tools for the comprehensive visualization of multi-omics data, including genomics, transcriptomics, and proteomics. Offers user-friendly functions to generate publication-quality plots, thereby facilitating the exploration and interpretation of complex biological datasets. Supports seamless integration with popular R visualization frameworks and is well-suited for both exploratory data analysis and the presentation of final results. Key formats and methods are presented in Huang, S., et al. (2024) "The Born in Guangzhou Cohort Study enables generational genetic discoveries" <doi:10.1038/s41586-023-06988-4>.
Authors:
omixVizR_1.4.5.tar.gz
omixVizR_1.4.5.zip(r-4.7)omixVizR_1.4.5.zip(r-4.6)omixVizR_1.4.5.zip(r-4.5)
omixVizR_1.4.5.tgz(r-4.6-any)omixVizR_1.4.5.tgz(r-4.5-any)
omixVizR_1.4.5.tar.gz(r-4.6-any)
omixVizR_1.4.5.tgz(r-4.5-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
omixVizR/json (API)
| # Install 'omixVizR' in R: |
| install.packages('omixVizR', repos = c('https://leslie-lu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/leslie-lu/omixvizr/issues
Last updated from:92bf95f9a1. Checks:6 OK, 3 FAIL. Indexed: yes.
The latest version of this package failed to build. Look at thebuild logs for more information.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 172 | ||
| source / vignettes | OK | 202 | ||
| linux-release-x86_64 | OK | 213 | ||
| macos-release-arm64 | FAIL | 149 | ||
| macos-oldrel-arm64 | FAIL | 140 | ||
| windows-devel | OK | 139 | ||
| windows-release | OK | 169 | ||
| windows-oldrel | FAIL | 57 | ||
| wasm-release | OK | 125 |
Exports:MR_2SLSplot_forestplot_gwas_powerplot_heatmapplot_qqman
Dependencies:aplotaskpassbase64encbootclicommonmarkcorpcorcpp11curldata.tabledigestdplyrfarverfsgenericsgenpwrggbreakggfunggplot2ggplotifyggrepelggsciggtextgluegridExtragridGraphicsgridtextgtablehttr2isobandjpegjsonlitelabelinglatticelifecyclelitedownlulab.utilsmagrittrmarkdownMASSMatrixnleqslvopensslpatchworkpheatmappillarpkgconfigpngpurrrR6rappdirsRColorBrewerRcpprlangS7scalesshowtextshowtextdbstringistringrsyssysfontssystemfontstibbletidyselectutf8vctrsviridisLitewithrxfunxml2yulab.utils
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| MR_2SLS | MR_2SLS |
| plot_forest | plot_forest |
| plot_gwas_power | plot_gwas_power |
| plot_heatmap | plot_heatmap |
| plot_qqman | plot_qqman |
